diff --git a/q2_alignment/__init__.py b/q2_alignment/__init__.py
index c9c863e..1e6c4b2 100644
--- a/q2_alignment/__init__.py
+++ b/q2_alignment/__init__.py
@@ -9,6 +9,6 @@
 from ._mafft import mafft
 from ._filter import mask
 
-__version__ = '0.0.5'
+__version__ = '0.0.6'
 
 __all__ = ['mafft', 'mask']
diff --git a/setup.py b/setup.py
index 83408ca..35e247b 100644
--- a/setup.py
+++ b/setup.py
@@ -11,9 +11,9 @@
 setup(
     name="q2-alignment",
     # TODO stop duplicating version string
-    version="0.0.5",
+    version="0.0.6",
     packages=find_packages(),
-    install_requires=['scikit-bio', 'qiime >= 2.0.5', 'q2-types >= 0.0.5'],
+    install_requires=['scikit-bio', 'qiime >= 2.0.6', 'q2-types >= 0.0.6'],
     # package_data={'q2_alignment': ['markdown/*md']},
     author="Greg Caporaso",
     author_email="gregcaporaso@gmail.com",