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Ensembl Project

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  1. ensembl-vep ensembl-vep Public

    The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

    Perl 466 157

  2. WiggleTools WiggleTools Public

    Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

    C 146 26

  3. VEP_plugins VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl 143 121

  4. ensembl-rest ensembl-rest Public

    Language agnostic RESTful data access to Ensembl data over HTTP

    Perl 141 63

  5. ensembl ensembl Public

    The Ensembl Core Perl API and SQL schema

    Perl 81 77

  6. ensembl-pipeline ensembl-pipeline Public

    *DEPRECATED* Job management for the Ensembl Genebuild pipeline

    Perl 60 29

Repositories

Showing 10 of 211 repositories
  • ensembl-variation Public

    The Ensembl Variation Perl API and SQL schema

    Ensembl/ensembl-variation’s past year of commit activity
    Perl 27 Apache-2.0 56 0 10 Updated Feb 7, 2025
  • ensembl-production Public

    Ensembl Production code

    Ensembl/ensembl-production’s past year of commit activity
    Perl 11 Apache-2.0 42 0 5 Updated Feb 7, 2025
  • ensembl-compara Public

    The Ensembl Compara Perl API and SQL schema

    Ensembl/ensembl-compara’s past year of commit activity
    Perl 51 Apache-2.0 69 0 5 Updated Feb 7, 2025
  • ensembl-website-help-and-docs Public

    documentation for the new Ensembl site

    Ensembl/ensembl-website-help-and-docs’s past year of commit activity
    TypeScript 1 5 0 4 Updated Feb 7, 2025
  • VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Ensembl/VEP_plugins’s past year of commit activity
    Perl 143 Apache-2.0 121 7 6 Updated Feb 6, 2025
  • ensembl-production-metazoa Public

    Metazoan production helper library and script to import ad-hoc annotations.

    Ensembl/ensembl-production-metazoa’s past year of commit activity
    Shell 1 Apache-2.0 1 0 0 Updated Feb 6, 2025
  • ensembl-genomio Public

    Pipelines to turn basic genomic data into Ensembl cores and back

    Ensembl/ensembl-genomio’s past year of commit activity
    Python 9 Apache-2.0 7 0 2 Updated Feb 6, 2025
  • ensembl-anno Public
    Ensembl/ensembl-anno’s past year of commit activity
    Python 10 Apache-2.0 7 1 3 Updated Feb 6, 2025
  • ensembl-client Public

    Ensembl beta client

    Ensembl/ensembl-client’s past year of commit activity
    TypeScript 13 Apache-2.0 4 0 2 Updated Feb 5, 2025
  • ensembl-funcgen Public

    Ensembl Funcgen Perl API and SQL schema

    Ensembl/ensembl-funcgen’s past year of commit activity
    Perl 14 Apache-2.0 17 0 0 Updated Feb 4, 2025